Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf6P70196 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf6P70196 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf6P70196 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf6P70196 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf6P70196 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Traf6P70196 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf6P70196 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Traf6P70196 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf6P70196 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Traf6P70196 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.71□□□□□ -0.21
Traf6P70196 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Rprl2-201ENSMUST00000157150 290 ntBASIC13.71□□□□□ -0.21
Traf6P70196 Gm18737-201ENSMUST00000173594 937 ntBASIC13.71□□□□□ -0.21
Traf6P70196 Gm18889-201ENSMUST00000174284 929 ntBASIC13.71□□□□□ -0.21
Traf6P70196 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.71□□□□□ -0.21
Traf6P70196 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.71□□□□□ -0.21
Traf6P70196 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Gm19087-201ENSMUST00000191430 946 ntBASIC13.71□□□□□ -0.21
Traf6P70196 Gm38225-201ENSMUST00000194001 393 ntBASIC13.71□□□□□ -0.21
Traf6P70196 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Traf6P70196 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.71□□□□□ -0.21
Traf6P70196 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf6P70196 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Traf6P70196 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Traf6P70196 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Traf6P70196 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.7□□□□□ -0.22
Traf6P70196 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Traf6P70196 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.7□□□□□ -0.22
Traf6P70196 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.7□□□□□ -0.22
Traf6P70196 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.7□□□□□ -0.22
Traf6P70196 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Traf6P70196 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Traf6P70196 Mir1895-201ENSMUST00000122615 79 ntBASIC13.7□□□□□ -0.22
Traf6P70196 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.7□□□□□ -0.22
Traf6P70196 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.7□□□□□ -0.22
Traf6P70196 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.7□□□□□ -0.22
Traf6P70196 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.7□□□□□ -0.22
Traf6P70196 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.7□□□□□ -0.22
Traf6P70196 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Traf6P70196 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Traf6P70196 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Traf6P70196 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Traf6P70196 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Traf6P70196 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Traf6P70196 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Traf6P70196 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.69□□□□□ -0.22
Traf6P70196 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Traf6P70196 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Traf6P70196 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms