Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Lhx1P63006 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lhx1P63006 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lhx1P63006 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.65□□□□□ -0.22
Lhx1P63006 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx1P63006 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Lhx1P63006 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx1P63006 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lhx1P63006 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lhx1P63006 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm12341-201ENSMUST00000119724 503 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx1P63006 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm23984-201ENSMUST00000157139 203 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Gm44719-201ENSMUST00000206404 149 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lhx1P63006 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx1P63006 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm6180-201ENSMUST00000065243 498 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx1P63006 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.64□□□□□ -0.23
Lhx1P63006 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.63□□□□□ -0.23
Lhx1P63006 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.63□□□□□ -0.23
Lhx1P63006 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Gm11524-201ENSMUST00000119349 807 ntBASIC13.63□□□□□ -0.23
Lhx1P63006 Gm12490-201ENSMUST00000120255 560 ntBASIC13.63□□□□□ -0.23
Lhx1P63006 Gm11424-201ENSMUST00000121929 829 ntBASIC13.63□□□□□ -0.23
Lhx1P63006 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Gm6745-201ENSMUST00000199216 526 ntBASIC13.63□□□□□ -0.23
Lhx1P63006 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx1P63006 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.63□□□□□ -0.23
Lhx1P63006 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lhx1P63006 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms