Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a1P61620 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.28□□□□□ -0.44
Sec61a1P61620 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.28□□□□□ -0.44
Sec61a1P61620 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Gm16026-204ENSMUST00000162652 683 ntBASIC12.28□□□□□ -0.44
Sec61a1P61620 Gm43125-201ENSMUST00000201724 730 ntBASIC12.28□□□□□ -0.44
Sec61a1P61620 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.28□□□□□ -0.44
Sec61a1P61620 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.28□□□□□ -0.44
Sec61a1P61620 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a1P61620 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Sec61a1P61620 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a1P61620 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a1P61620 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a1P61620 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a1P61620 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Sec61a1P61620 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.27□□□□□ -0.44
Sec61a1P61620 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sec61a1P61620 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Sec61a1P61620 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a1P61620 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a1P61620 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a1P61620 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm6973-201ENSMUST00000117080 721 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm15483-201ENSMUST00000120338 456 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm18057-201ENSMUST00000208220 503 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sec61a1P61620 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.27□□□□□ -0.45
Sec61a1P61620 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a1P61620 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.26□□□□□ -0.45
Sec61a1P61620 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms