Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.98□□□□□ -0.01
Nub1P54729 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nub1P54729 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Nub1P54729 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nub1P54729 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.98□□□□□ -0.01
Nub1P54729 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.98□□□□□ -0.01
Nub1P54729 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.98□□□□□ -0.01
Nub1P54729 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.98□□□□□ -0.01
Nub1P54729 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.98□□□□□ -0.01
Nub1P54729 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.98□□□□□ -0.01
Nub1P54729 Mir7023-201ENSMUST00000185093 64 ntBASIC14.98□□□□□ -0.01
Nub1P54729 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nub1P54729 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nub1P54729 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nub1P54729 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nub1P54729 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nub1P54729 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.97□□□□□ -0.01
Nub1P54729 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Nub1P54729 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Nub1P54729 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nub1P54729 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.97□□□□□ -0.01
Nub1P54729 Gm4875-201ENSMUST00000118257 786 ntBASIC14.97□□□□□ -0.01
Nub1P54729 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.97□□□□□ -0.01
Nub1P54729 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.97□□□□□ -0.01
Nub1P54729 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.97□□□□□ -0.01
Nub1P54729 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.97□□□□□ -0.01
Nub1P54729 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.97□□□□□ -0.01
Nub1P54729 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.97□□□□□ -0.01
Nub1P54729 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.97□□□□□ -0.01
Nub1P54729 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.97□□□□□ -0.01
Nub1P54729 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nub1P54729 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.96□□□□□ -0.01
Nub1P54729 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nub1P54729 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.96□□□□□ -0.01
Nub1P54729 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Nub1P54729 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.96□□□□□ -0.01
Nub1P54729 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.96□□□□□ -0.01
Nub1P54729 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.96□□□□□ -0.01
Nub1P54729 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.96□□□□□ -0.01
Nub1P54729 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nub1P54729 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nub1P54729 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nub1P54729 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms