Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Gm18027-201ENSMUST00000218947 619 ntBASIC13.16□□□□□ -0.3
Nkx2-6P43688 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.16□□□□□ -0.3
Nkx2-6P43688 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Gm15824-201ENSMUST00000119516 955 ntBASIC13.15□□□□□ -0.3
Nkx2-6P43688 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Gm6266-201ENSMUST00000203844 806 ntBASIC13.15□□□□□ -0.3
Nkx2-6P43688 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Gm17794-201ENSMUST00000220252 955 ntBASIC13.15□□□□□ -0.3
Nkx2-6P43688 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-6P43688 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx2-6P43688 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Gm24420-201ENSMUST00000176676 59 ntBASIC13.14□□□□□ -0.31
Nkx2-6P43688 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.14□□□□□ -0.31
Nkx2-6P43688 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-6P43688 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Gm19078-201ENSMUST00000206311 727 ntBASIC13.13□□□□□ -0.31
Nkx2-6P43688 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms