Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-2P42586 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx2-2P42586 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-2P42586 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.76□□□□□ -0.37
Nkx2-2P42586 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-2P42586 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-2P42586 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx2-2P42586 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.76□□□□□ -0.37
Nkx2-2P42586 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Gm24420-201ENSMUST00000176676 59 ntBASIC12.75□□□□□ -0.37
Nkx2-2P42586 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.75□□□□□ -0.37
Nkx2-2P42586 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-2P42586 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.74□□□□□ -0.37
Nkx2-2P42586 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Mir7023-201ENSMUST00000185093 64 ntBASIC12.74□□□□□ -0.37
Nkx2-2P42586 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.74□□□□□ -0.37
Nkx2-2P42586 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.74□□□□□ -0.37
Nkx2-2P42586 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.74□□□□□ -0.37
Nkx2-2P42586 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-2P42586 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.73□□□□□ -0.37
Nkx2-2P42586 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms