Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.98□□□□□ -0.01
Pbx1P41778 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pbx1P41778 Gm6916-202ENSMUST00000205523 195 ntBASIC14.98□□□□□ -0.01
Pbx1P41778 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pbx1P41778 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.98□□□□□ -0.01
Pbx1P41778 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Mir698-201ENSMUST00000102164 109 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.97□□□□□ -0.01
Pbx1P41778 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm9824-201ENSMUST00000178707 561 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm27525-201ENSMUST00000184465 107 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm18206-201ENSMUST00000207027 926 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.97□□□□□ -0.01
Pbx1P41778 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.97□□□□□ -0.01
Pbx1P41778 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pbx1P41778 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pbx1P41778 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pbx1P41778 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pbx1P41778 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pbx1P41778 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pbx1P41778 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pbx1P41778 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pbx1P41778 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.96□□□□□ -0.01
Pbx1P41778 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pbx1P41778 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.96□□□□□ -0.01
Pbx1P41778 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.96□□□□□ -0.01
Pbx1P41778 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Pbx1P41778 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.96□□□□□ -0.01
Pbx1P41778 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pbx1P41778 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pbx1P41778 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pbx1P41778 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Pbx1P41778 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Pbx1P41778 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pbx1P41778 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pbx1P41778 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pbx1P41778 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pbx1P41778 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pbx1P41778 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pbx1P41778 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.95□□□□□ -0.02
Pbx1P41778 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pbx1P41778 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms