Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.22□□□□□ -0.13
Cxcl12P40224 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Gm11618-201ENSMUST00000117946 267 ntBASIC14.22□□□□□ -0.13
Cxcl12P40224 Gm4986-201ENSMUST00000119731 549 ntBASIC14.22□□□□□ -0.13
Cxcl12P40224 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Gm7029-201ENSMUST00000173226 450 ntBASIC14.22□□□□□ -0.13
Cxcl12P40224 Gm16505-201ENSMUST00000179981 232 ntBASIC14.22□□□□□ -0.13
Cxcl12P40224 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl12P40224 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.22□□□□□ -0.13
Cxcl12P40224 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl12P40224 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.22□□□□□ -0.13
Cxcl12P40224 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.21□□□□□ -0.13
Cxcl12P40224 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Gm7046-201ENSMUST00000221351 977 ntBASIC14.21□□□□□ -0.13
Cxcl12P40224 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cxcl12P40224 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl12P40224 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cxcl12P40224 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl12P40224 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl12P40224 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl12P40224 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl12P40224 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cxcl12P40224 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.2□□□□□ -0.14
Cxcl12P40224 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.2□□□□□ -0.14
Cxcl12P40224 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
Cxcl12P40224 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Cxcl12P40224 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Cxcl12P40224 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Cxcl12P40224 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Gm29608-201ENSMUST00000190444 463 ntBASIC14.2□□□□□ -0.14
Cxcl12P40224 Gm17330-201ENSMUST00000221047 165 ntBASIC14.2□□□□□ -0.14
Cxcl12P40224 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.2□□□□□ -0.14
Cxcl12P40224 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl12P40224 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms