Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Timp3P39876 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Timp3P39876 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.44□□□□□ -0.58
Timp3P39876 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.44□□□□□ -0.58
Timp3P39876 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Timp3P39876 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Timp3P39876 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Timp3P39876 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Timp3P39876 Gm15321-201ENSMUST00000121290 288 ntBASIC11.43□□□□□ -0.58
Timp3P39876 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Timp3P39876 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Timp3P39876 Gm44855-201ENSMUST00000205725 362 ntBASIC11.43□□□□□ -0.58
Timp3P39876 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Timp3P39876 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.43□□□□□ -0.58
Timp3P39876 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.43□□□□□ -0.58
Timp3P39876 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Timp3P39876 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Timp3P39876 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Timp3P39876 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.43□□□□□ -0.58
Timp3P39876 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.42□□□□□ -0.58
Timp3P39876 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.42□□□□□ -0.58
Timp3P39876 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.42□□□□□ -0.58
Timp3P39876 Gm4875-201ENSMUST00000118257 786 ntBASIC11.42□□□□□ -0.58
Timp3P39876 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.42□□□□□ -0.58
Timp3P39876 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Timp3P39876 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.42□□□□□ -0.58
Timp3P39876 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.42□□□□□ -0.58
Timp3P39876 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.42□□□□□ -0.58
Timp3P39876 Gm43703-201ENSMUST00000200523 763 ntBASIC11.42□□□□□ -0.58
Timp3P39876 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.42□□□□□ -0.58
Timp3P39876 Gm20445-201ENSMUST00000061905 565 ntBASIC11.42□□□□□ -0.58
Timp3P39876 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Mir125a-201ENSMUST00000083545 68 ntBASIC11.42□□□□□ -0.58
Timp3P39876 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Timp3P39876 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Timp3P39876 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Timp3P39876 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.42□□□□□ -0.58
Timp3P39876 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Timp3P39876 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Timp3P39876 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms