Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Sftpa1P35242 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Gm27501-201ENSMUST00000183599 107 ntBASIC12.8□□□□□ -0.36
Sftpa1P35242 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.8□□□□□ -0.36
Sftpa1P35242 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.8□□□□□ -0.36
Sftpa1P35242 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.8□□□□□ -0.36
Sftpa1P35242 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sftpa1P35242 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Sftpa1P35242 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.8□□□□□ -0.36
Sftpa1P35242 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.79□□□□□ -0.36
Sftpa1P35242 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Gm6152-201ENSMUST00000151704 340 ntBASIC12.79□□□□□ -0.36
Sftpa1P35242 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.79□□□□□ -0.36
Sftpa1P35242 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.79□□□□□ -0.36
Sftpa1P35242 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Sftpa1P35242 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sftpa1P35242 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sftpa1P35242 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms