Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc5P32043 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc5P32043 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc5P32043 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hoxc5P32043 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm13823-201ENSMUST00000119930 345 ntBASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm6222-201ENSMUST00000120787 396 ntBASIC12.92□□□□□ -0.34
Hoxc5P32043 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxc5P32043 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.92□□□□□ -0.34
Hoxc5P32043 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Mir6990-201ENSMUST00000183724 91 ntBASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm43125-201ENSMUST00000201724 730 ntBASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Hoxc5P32043 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc5P32043 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc5P32043 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc5P32043 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc5P32043 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Hoxc5P32043 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc5P32043 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc5P32043 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc5P32043 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms