Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cd28P31041 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd28P31041 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd28P31041 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cd28P31041 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cd28P31041 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd28P31041 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cd28P31041 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cd28P31041 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.27□□□□□ -0.44
Cd28P31041 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.27□□□□□ -0.45
Cd28P31041 Gm13036-201ENSMUST00000117799 748 ntBASIC12.27□□□□□ -0.45
Cd28P31041 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.27□□□□□ -0.45
Cd28P31041 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cd28P31041 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.27□□□□□ -0.45
Cd28P31041 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Cd28P31041 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.27□□□□□ -0.45
Cd28P31041 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd28P31041 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Gm7862-201ENSMUST00000121461 292 ntBASIC12.26□□□□□ -0.45
Cd28P31041 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cd28P31041 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cd28P31041 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.26□□□□□ -0.45
Cd28P31041 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.26□□□□□ -0.45
Cd28P31041 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.26□□□□□ -0.45
Cd28P31041 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd28P31041 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd28P31041 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.25□□□□□ -0.45
Cd28P31041 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.25□□□□□ -0.45
Cd28P31041 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd28P31041 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd28P31041 Thap2-203ENSMUST00000218989 527 ntBASIC12.25□□□□□ -0.45
Cd28P31041 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.25□□□□□ -0.45
Cd28P31041 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Cd28P31041 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms