Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.39□□□□□ -0.43
P20040 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.39□□□□□ -0.43
P20040 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.38□□□□□ -0.43
P20040 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.38□□□□□ -0.43
P20040 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P20040 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.38□□□□□ -0.43
P20040 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P20040 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.38□□□□□ -0.43
P20040 Gm13616-201ENSMUST00000120600 222 ntBASIC12.38□□□□□ -0.43
P20040 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.38□□□□□ -0.43
P20040 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
P20040 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Gm9824-201ENSMUST00000178707 561 ntBASIC12.38□□□□□ -0.43
P20040 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.38□□□□□ -0.43
P20040 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.38□□□□□ -0.43
P20040 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.38□□□□□ -0.43
P20040 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
P20040 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P20040 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P20040 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P20040 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.37□□□□□ -0.43
P20040 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.37□□□□□ -0.43
P20040 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
P20040 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P20040 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
P20040 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Gm8749-201ENSMUST00000117737 331 ntBASIC12.37□□□□□ -0.43
P20040 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.37□□□□□ -0.43
P20040 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
P20040 Gm5479-201ENSMUST00000160578 435 ntBASIC12.37□□□□□ -0.43
P20040 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.37□□□□□ -0.43
P20040 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.37□□□□□ -0.43
P20040 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.37□□□□□ -0.43
P20040 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.37□□□□□ -0.43
P20040 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P20040 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.37□□□□□ -0.43
P20040 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P20040 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
P20040 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P20040 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P20040 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms