Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm29013-201ENSMUST00000187431 237 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Gm19080-201ENSMUST00000196082 550 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Gm42612-201ENSMUST00000197986 623 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Gm43170-201ENSMUST00000199827 612 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Gm9797-201ENSMUST00000052902 613 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ly6c1P0CW02 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.66□□□□□ -0.54
Ly6c1P0CW02 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.66□□□□□ -0.54
Ly6c1P0CW02 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ly6c1P0CW02 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm22189-201ENSMUST00000103822 86 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm4804-201ENSMUST00000182234 999 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm17917-201ENSMUST00000218561 953 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ly6c1P0CW02 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms