Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
ApoeP08226 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ApoeP08226 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Gm9385-201ENSMUST00000117563 472 ntBASIC13.17□□□□□ -0.3
ApoeP08226 Gm15957-201ENSMUST00000118893 974 ntBASIC13.17□□□□□ -0.3
ApoeP08226 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.17□□□□□ -0.3
ApoeP08226 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.17□□□□□ -0.3
ApoeP08226 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.17□□□□□ -0.3
ApoeP08226 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ApoeP08226 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.16□□□□□ -0.3
ApoeP08226 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ApoeP08226 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ApoeP08226 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.16□□□□□ -0.3
ApoeP08226 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.16□□□□□ -0.3
ApoeP08226 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.16□□□□□ -0.3
ApoeP08226 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.16□□□□□ -0.3
ApoeP08226 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.16□□□□□ -0.3
ApoeP08226 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
ApoeP08226 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
ApoeP08226 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ApoeP08226 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.16□□□□□ -0.3
ApoeP08226 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ApoeP08226 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.15□□□□□ -0.3
ApoeP08226 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.15□□□□□ -0.3
ApoeP08226 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.15□□□□□ -0.3
ApoeP08226 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.15□□□□□ -0.3
ApoeP08226 Gm7977-201ENSMUST00000193787 748 ntBASIC13.15□□□□□ -0.3
ApoeP08226 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.15□□□□□ -0.3
ApoeP08226 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.15□□□□□ -0.3
ApoeP08226 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.15□□□□□ -0.3
ApoeP08226 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.15□□□□□ -0.3
ApoeP08226 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ApoeP08226 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ApoeP08226 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ApoeP08226 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.15□□□□□ -0.3
ApoeP08226 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
ApoeP08226 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
ApoeP08226 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.14□□□□□ -0.31
ApoeP08226 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.14□□□□□ -0.31
ApoeP08226 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.14□□□□□ -0.31
ApoeP08226 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
ApoeP08226 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
ApoeP08226 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms