Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.13□□□□□ -0.31
Krt1P04104 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.13□□□□□ -0.31
Krt1P04104 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.13□□□□□ -0.31
Krt1P04104 Gm10275-202ENSMUST00000168697 495 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Gm4535-201ENSMUST00000182274 558 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Gm45098-201ENSMUST00000207179 657 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Gm10275-201ENSMUST00000092620 635 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Gm10355-201ENSMUST00000097146 517 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.13□□□□□ -0.31
Krt1P04104 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Krt1P04104 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.13□□□□□ -0.31
Krt1P04104 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.13□□□□□ -0.31
Krt1P04104 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Krt1P04104 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Krt1P04104 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.12□□□□□ -0.31
Krt1P04104 AA414768-201ENSMUST00000121924 1257 ntBASIC13.12□□□□□ -0.31
Krt1P04104 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 Gm23634-201ENSMUST00000175071 91 ntBASIC13.12□□□□□ -0.31
Krt1P04104 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Gm7977-201ENSMUST00000193787 748 ntBASIC13.12□□□□□ -0.31
Krt1P04104 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.12□□□□□ -0.31
Krt1P04104 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.12□□□□□ -0.31
Krt1P04104 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Krt1P04104 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.12□□□□□ -0.31
Krt1P04104 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Krt1P04104 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Krt1P04104 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Krt1P04104 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms