Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.97□□□□□ -0.49
H3f3cP02301 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Gm27321-201ENSMUST00000185021 205 ntBASIC11.97□□□□□ -0.49
H3f3cP02301 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.97□□□□□ -0.49
H3f3cP02301 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.97□□□□□ -0.49
H3f3cP02301 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.97□□□□□ -0.49
H3f3cP02301 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
H3f3cP02301 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
H3f3cP02301 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H3f3cP02301 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.96□□□□□ -0.49
H3f3cP02301 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
H3f3cP02301 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
H3f3cP02301 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
H3f3cP02301 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
H3f3cP02301 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.96□□□□□ -0.49
H3f3cP02301 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.96□□□□□ -0.49
H3f3cP02301 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Gm38294-201ENSMUST00000192831 381 ntBASIC11.96□□□□□ -0.49
H3f3cP02301 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.96□□□□□ -0.49
H3f3cP02301 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.96□□□□□ -0.49
H3f3cP02301 Gm44344-201ENSMUST00000200287 129 ntBASIC11.96□□□□□ -0.49
H3f3cP02301 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.96□□□□□ -0.49
H3f3cP02301 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.96□□□□□ -0.49
H3f3cP02301 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.96□□□□□ -0.49
H3f3cP02301 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
H3f3cP02301 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H3f3cP02301 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H3f3cP02301 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H3f3cP02301 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H3f3cP02301 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
H3f3cP02301 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
H3f3cP02301 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H3f3cP02301 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H3f3cP02301 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.95□□□□□ -0.5
H3f3cP02301 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.95□□□□□ -0.5
H3f3cP02301 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Gm17837-201ENSMUST00000186435 985 ntBASIC11.95□□□□□ -0.5
H3f3cP02301 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.95□□□□□ -0.5
H3f3cP02301 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.95□□□□□ -0.5
H3f3cP02301 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
H3f3cP02301 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
H3f3cP02301 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
H3f3cP02301 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.95□□□□□ -0.5
H3f3cP02301 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.95□□□□□ -0.5
H3f3cP02301 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
H3f3cP02301 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H3f3cP02301 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H3f3cP02301 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H3f3cP02301 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms