Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm13223-201ENSMUST00000118609 747 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm15393-201ENSMUST00000120499 219 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm13616-201ENSMUST00000120600 222 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm14767-201ENSMUST00000121559 586 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm3436-201ENSMUST00000179930 840 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igh-VJ558P01758 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Gm12585-201ENSMUST00000117307 290 ntBASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Gm8927-201ENSMUST00000181978 981 ntBASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Gm4804-201ENSMUST00000182234 999 ntBASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Gm3222-201ENSMUST00000071282 990 ntBASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igh-VJ558P01758 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Gm13453-201ENSMUST00000118708 357 ntBASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Gm13385-201ENSMUST00000121089 220 ntBASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.01□□□□□ -0.49
Igh-VJ558P01758 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.01□□□□□ -0.49
Igh-VJ558P01758 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms