Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.34□□□□□ -0.11
CopeO89079 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CopeO89079 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CopeO89079 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CopeO89079 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.34□□□□□ -0.11
CopeO89079 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
CopeO89079 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.34□□□□□ -0.11
CopeO89079 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CopeO89079 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.34□□□□□ -0.11
CopeO89079 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CopeO89079 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CopeO89079 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.33□□□□□ -0.11
CopeO89079 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CopeO89079 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.11
CopeO89079 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CopeO89079 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CopeO89079 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CopeO89079 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.33□□□□□ -0.12
CopeO89079 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.33□□□□□ -0.12
CopeO89079 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.33□□□□□ -0.12
CopeO89079 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CopeO89079 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.33□□□□□ -0.12
CopeO89079 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.33□□□□□ -0.12
CopeO89079 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.33□□□□□ -0.12
CopeO89079 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.33□□□□□ -0.12
CopeO89079 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.33□□□□□ -0.12
CopeO89079 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.33□□□□□ -0.12
CopeO89079 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.33□□□□□ -0.12
CopeO89079 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CopeO89079 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CopeO89079 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopeO89079 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CopeO89079 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CopeO89079 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
CopeO89079 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CopeO89079 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CopeO89079 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.32□□□□□ -0.12
CopeO89079 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.32□□□□□ -0.12
CopeO89079 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.32□□□□□ -0.12
CopeO89079 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CopeO89079 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.32□□□□□ -0.12
CopeO89079 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CopeO89079 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms