Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm26095-201ENSMUST00000179270 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm22171-201ENSMUST00000179283 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm23936-201ENSMUST00000179354 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm22619-201ENSMUST00000179516 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm25255-201ENSMUST00000179579 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24755-201ENSMUST00000179691 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm26506-201ENSMUST00000179692 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm25086-201ENSMUST00000179931 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm23243-201ENSMUST00000180047 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24659-201ENSMUST00000180212 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24169-201ENSMUST00000180244 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm23689-201ENSMUST00000180354 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm27359-201ENSMUST00000184153 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm27785-201ENSMUST00000184268 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm27466-201ENSMUST00000184396 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm27703-201ENSMUST00000184836 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Gm24158-201ENSMUST00000175263 71 ntBASIC15.24■□□□□ 0.03
Trim30cD3YVI9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim30cD3YVI9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim30cD3YVI9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Mir449b-201ENSMUST00000104833 80 ntBASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Gm13616-201ENSMUST00000120600 222 ntBASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms