Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.03□□□□□ -0.16
Rrn3B2RS91 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.03□□□□□ -0.16
Rrn3B2RS91 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrn3B2RS91 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Rrn3B2RS91 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrn3B2RS91 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrn3B2RS91 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Gm15460-201ENSMUST00000118147 391 ntBASIC14.02□□□□□ -0.17
Rrn3B2RS91 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.02□□□□□ -0.17
Rrn3B2RS91 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.02□□□□□ -0.17
Rrn3B2RS91 Gm4804-201ENSMUST00000182234 999 ntBASIC14.02□□□□□ -0.17
Rrn3B2RS91 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrn3B2RS91 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.02□□□□□ -0.17
Rrn3B2RS91 Gm43703-201ENSMUST00000200523 763 ntBASIC14.02□□□□□ -0.17
Rrn3B2RS91 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.02□□□□□ -0.17
Rrn3B2RS91 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrn3B2RS91 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.01□□□□□ -0.17
Rrn3B2RS91 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.01□□□□□ -0.17
Rrn3B2RS91 Gm14719-201ENSMUST00000121891 340 ntBASIC14.01□□□□□ -0.17
Rrn3B2RS91 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.01□□□□□ -0.17
Rrn3B2RS91 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrn3B2RS91 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms