Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm4986-201ENSMUST00000119731 549 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm14704-201ENSMUST00000120300 874 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm11964-201ENSMUST00000120982 444 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm15236-201ENSMUST00000117309 379 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm2231-201ENSMUST00000125661 612 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm4768-201ENSMUST00000206199 686 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scn7aB1AYL1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Gm21769-201ENSMUST00000211922 111 ntBASIC17.54■□□□□ 0.4
Scn7aB1AYL1 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn7aB1AYL1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn7aB1AYL1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.52■□□□□ 0.4
Scn7aB1AYL1 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms