Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.26□□□□□ -0.61
Gm12887B1AVM1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.25□□□□□ -0.61
Gm12887B1AVM1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12887B1AVM1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm5479-201ENSMUST00000160578 435 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm6550-201ENSMUST00000187574 993 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm10154-201ENSMUST00000084445 354 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms