Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Gm42627-201ENSMUST00000197347 224 ntBASIC11.73□□□□□ -0.53
Col6a4A2AX52 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.73□□□□□ -0.53
Col6a4A2AX52 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm45865-201ENSMUST00000211815 945 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm11803-201ENSMUST00000119966 444 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm16177-201ENSMUST00000120728 718 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm26464-201ENSMUST00000157094 305 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm37259-201ENSMUST00000193903 849 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm45880-201ENSMUST00000213041 853 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.72□□□□□ -0.53
Col6a4A2AX52 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a4A2AX52 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Gm13612-201ENSMUST00000119276 390 ntBASIC11.71□□□□□ -0.53
Col6a4A2AX52 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Col6a4A2AX52 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms