Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Paupar-201ENSMUST00000194826 3482 ntBASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm43767-201ENSMUST00000198933 381 ntBASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav6n-6A0A075B6B2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav6n-6A0A075B6B2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Thap2-203ENSMUST00000218989 527 ntBASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms