Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Mir1894-201ENSMUST00000122802 81 ntBASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Gm5161-201ENSMUST00000075243 853 ntBASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Gm2495-201ENSMUST00000191160 466 ntBASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcb1Q9Z0H3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm17150-201ENSMUST00000165577 381 ntBASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm5035-201ENSMUST00000215581 927 ntBASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcb1Q9Z0H3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Smarcb1Q9Z0H3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Smarcb1Q9Z0H3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Gm6244-201ENSMUST00000178732 841 ntBASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Gm8463-201ENSMUST00000208573 613 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms