Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Gm43433-201ENSMUST00000196573 481 ntBASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lhx9Q9WUH2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Gm21470-201ENSMUST00000187680 696 ntBASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.23□□□□□ -0.29
Lhx9Q9WUH2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Gm11918-201ENSMUST00000121660 179 ntBASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx9Q9WUH2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms