Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm13015-201ENSMUST00000118674 204 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm27622-201ENSMUST00000183779 60 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm2451-201ENSMUST00000199447 999 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm10290-201ENSMUST00000200451 999 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm20949-201ENSMUST00000206478 952 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm45098-201ENSMUST00000207179 657 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.41□□□□□ -0.42
Nubp2Q9R061 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nubp2Q9R061 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.4□□□□□ -0.42
Nubp2Q9R061 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nubp2Q9R061 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nubp2Q9R061 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
Nubp2Q9R061 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nubp2Q9R061 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nubp2Q9R061 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.39□□□□□ -0.43
Nubp2Q9R061 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Gm25144-201ENSMUST00000179561 110 ntBASIC12.39□□□□□ -0.43
Nubp2Q9R061 Gm25352-201ENSMUST00000179815 110 ntBASIC12.39□□□□□ -0.43
Nubp2Q9R061 Gm27618-201ENSMUST00000183671 60 ntBASIC12.39□□□□□ -0.43
Nubp2Q9R061 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Gm29541-201ENSMUST00000191351 678 ntBASIC12.39□□□□□ -0.43
Nubp2Q9R061 Olfr286-202ENSMUST00000205305 969 ntBASIC12.39□□□□□ -0.43
Nubp2Q9R061 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Nubp2Q9R061 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nubp2Q9R061 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.38□□□□□ -0.43
Nubp2Q9R061 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nubp2Q9R061 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nubp2Q9R061 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nubp2Q9R061 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms