Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.61□□□□□ -0.23
Rrp8Q9DB85 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
Rrp8Q9DB85 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Carlr-201ENSMUST00000181515 2574 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gm44397-201ENSMUST00000195950 113 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rrp8Q9DB85 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.59□□□□□ -0.23
Rrp8Q9DB85 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rrp8Q9DB85 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rrp8Q9DB85 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rrp8Q9DB85 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Rrp8Q9DB85 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rrp8Q9DB85 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Rrp8Q9DB85 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rrp8Q9DB85 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rrp8Q9DB85 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rrp8Q9DB85 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rrp8Q9DB85 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rrp8Q9DB85 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rrp8Q9DB85 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rrp8Q9DB85 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rrp8Q9DB85 Gm13612-201ENSMUST00000119276 390 ntBASIC13.58□□□□□ -0.24
Rrp8Q9DB85 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms