Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
U2af1Q9D883 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.31■□□□□ 0.52
U2af1Q9D883 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.31■□□□□ 0.52
U2af1Q9D883 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.31■□□□□ 0.52
U2af1Q9D883 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
U2af1Q9D883 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
U2af1Q9D883 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1Q9D883 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
U2af1Q9D883 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
U2af1Q9D883 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
U2af1Q9D883 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
U2af1Q9D883 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.3■□□□□ 0.52
U2af1Q9D883 Gm5354-201ENSMUST00000182417 973 ntBASIC18.3■□□□□ 0.52
U2af1Q9D883 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.3■□□□□ 0.52
U2af1Q9D883 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
U2af1Q9D883 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1Q9D883 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
U2af1Q9D883 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.29■□□□□ 0.52
U2af1Q9D883 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.29■□□□□ 0.52
U2af1Q9D883 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.29■□□□□ 0.52
U2af1Q9D883 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.29■□□□□ 0.52
U2af1Q9D883 Gm24420-201ENSMUST00000176676 59 ntBASIC18.29■□□□□ 0.52
U2af1Q9D883 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.29■□□□□ 0.52
U2af1Q9D883 Gm18624-201ENSMUST00000220966 658 ntBASIC18.29■□□□□ 0.52
U2af1Q9D883 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.29■□□□□ 0.52
U2af1Q9D883 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
U2af1Q9D883 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
U2af1Q9D883 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Mir698-201ENSMUST00000102164 109 ntBASIC18.28■□□□□ 0.52
U2af1Q9D883 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.28■□□□□ 0.52
U2af1Q9D883 Gm23984-201ENSMUST00000157139 203 ntBASIC18.28■□□□□ 0.52
U2af1Q9D883 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Gm45668-201ENSMUST00000211271 493 ntBASIC18.28■□□□□ 0.52
U2af1Q9D883 Gm19220-201ENSMUST00000222682 803 ntBASIC18.28■□□□□ 0.52
U2af1Q9D883 Gm15823-201ENSMUST00000064305 670 ntBASIC18.28■□□□□ 0.52
U2af1Q9D883 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
U2af1Q9D883 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2af1Q9D883 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms