Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3bl1Q9D701 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3bl1Q9D701 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Upk3bl1Q9D701 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Upk3bl1Q9D701 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3bl1Q9D701 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Upk3bl1Q9D701 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3bl1Q9D701 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm5682-201ENSMUST00000173402 505 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm21362-201ENSMUST00000194272 928 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bl1Q9D701 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upk3bl1Q9D701 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upk3bl1Q9D701 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bl1Q9D701 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms