Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Gm27839-201ENSMUST00000184242 106 ntBASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm13689-201ENSMUST00000119360 685 ntBASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm12485-201ENSMUST00000119641 291 ntBASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm29741-201ENSMUST00000192667 421 ntBASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Stag1Q9D3E6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Gm12390-201ENSMUST00000117897 397 ntBASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Gm8584-201ENSMUST00000171982 758 ntBASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Gm7287-201ENSMUST00000205267 602 ntBASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Stag1Q9D3E6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Mir698-201ENSMUST00000102164 109 ntBASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 AY702102-202ENSMUST00000194651 1173 ntBASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Stag1Q9D3E6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms