Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44357-201ENSMUST00000195897 142 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm19658-201ENSMUST00000196231 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44367-201ENSMUST00000196836 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44350-201ENSMUST00000197197 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44390-201ENSMUST00000197533 144 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44313-201ENSMUST00000198018 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44486-201ENSMUST00000198508 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44314-201ENSMUST00000199263 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44394-201ENSMUST00000199558 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44484-201ENSMUST00000199873 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44466-201ENSMUST00000200264 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Gm44359-201ENSMUST00000200671 138 ntBASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim42Q9D2H5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Gm16026-204ENSMUST00000162652 683 ntBASIC13.95□□□□□ -0.18
Trim42Q9D2H5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Gm37230-201ENSMUST00000194491 818 ntBASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.95□□□□□ -0.18
Trim42Q9D2H5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Pck2-205ENSMUST00000226352 2784 ntBASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim42Q9D2H5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Gm4899-201ENSMUST00000178708 719 ntBASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms