Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gm43179-201ENSMUST00000198797 275 ntBASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nip7Q9CXK8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Gm27331-201ENSMUST00000183705 60 ntBASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nip7Q9CXK8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Gm10156-201ENSMUST00000122364 462 ntBASIC17.24■□□□□ 0.35
Nip7Q9CXK8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Gm7399-201ENSMUST00000032395 858 ntBASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nip7Q9CXK8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Gm29705-201ENSMUST00000212598 474 ntBASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nip7Q9CXK8 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms