Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf135Q9CWS1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf135Q9CWS1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf135Q9CWS1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Gm25287-201ENSMUST00000103846 110 ntBASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Gm22918-201ENSMUST00000103855 110 ntBASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rnf135Q9CWS1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.52□□□□□ -0.08
Rnf135Q9CWS1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Gm38225-201ENSMUST00000194001 393 ntBASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf135Q9CWS1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Gm15957-201ENSMUST00000118893 974 ntBASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Mir6977-201ENSMUST00000184960 64 ntBASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf135Q9CWS1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf135Q9CWS1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf135Q9CWS1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf135Q9CWS1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf135Q9CWS1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms