Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Gm7774-201ENSMUST00000200064 533 ntBASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Gm5312-201ENSMUST00000203728 547 ntBASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Gm16476-201ENSMUST00000221544 139 ntBASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Trim11Q99PQ2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trim11Q99PQ2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Gm24543-201ENSMUST00000103867 82 ntBASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Gm37714-201ENSMUST00000194742 342 ntBASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.89■□□□□ 0.13
Trim11Q99PQ2 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim11Q99PQ2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Mir449b-201ENSMUST00000104833 80 ntBASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Gm5779-201ENSMUST00000218467 910 ntBASIC15.88■□□□□ 0.13
Trim11Q99PQ2 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.88■□□□□ 0.13
Trim11Q99PQ2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim11Q99PQ2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms