Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.12■□□□□ 0.33
Trim34aQ99PP6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Gm24644-201ENSMUST00000157114 139 ntBASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim34aQ99PP6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Gm45331-201ENSMUST00000209868 554 ntBASIC17.1■□□□□ 0.33
Trim34aQ99PP6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim34aQ99PP6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Gm42693-201ENSMUST00000196779 631 ntBASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim34aQ99PP6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim34aQ99PP6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms