Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Efs-202ENSMUST00000227037 2540 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Mir877-201ENSMUST00000104738 85 ntBASIC17.09■□□□□ 0.33
RtcbQ99LF4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gm17330-201ENSMUST00000221047 165 ntBASIC17.09■□□□□ 0.33
RtcbQ99LF4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RtcbQ99LF4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.09■□□□□ 0.33
RtcbQ99LF4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RtcbQ99LF4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RtcbQ99LF4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm25927-201ENSMUST00000175058 117 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm38144-201ENSMUST00000192790 465 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm37922-201ENSMUST00000195596 455 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm45865-201ENSMUST00000211815 945 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RtcbQ99LF4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
RtcbQ99LF4 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.08■□□□□ 0.32
RtcbQ99LF4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Gm12241-201ENSMUST00000118330 726 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms