Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Gm24245-201ENSMUST00000157318 57 ntBASIC12.71□□□□□ -0.37
Lims1Q99JW4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.71□□□□□ -0.37
Lims1Q99JW4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.71□□□□□ -0.37
Lims1Q99JW4 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.71□□□□□ -0.37
Lims1Q99JW4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lims1Q99JW4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lims1Q99JW4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lims1Q99JW4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.71□□□□□ -0.38
Lims1Q99JW4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lims1Q99JW4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Lims1Q99JW4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.71□□□□□ -0.38
Lims1Q99JW4 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm14822-201ENSMUST00000122247 291 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm45453-201ENSMUST00000211758 853 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lims1Q99JW4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Gm13015-201ENSMUST00000118674 204 ntBASIC12.69□□□□□ -0.38
Lims1Q99JW4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Rprl2-201ENSMUST00000157150 290 ntBASIC12.69□□□□□ -0.38
Lims1Q99JW4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Gm27631-201ENSMUST00000184163 466 ntBASIC12.69□□□□□ -0.38
Lims1Q99JW4 Gm7063-201ENSMUST00000186840 981 ntBASIC12.69□□□□□ -0.38
Lims1Q99JW4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.69□□□□□ -0.38
Lims1Q99JW4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.69□□□□□ -0.38
Lims1Q99JW4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.69□□□□□ -0.38
Lims1Q99JW4 Gm18027-201ENSMUST00000218947 619 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms