Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd2Q99JR8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd2Q99JR8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Gm5370-201ENSMUST00000187187 574 ntBASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Gm8598-201ENSMUST00000221184 836 ntBASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd2Q99JR8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcd2Q99JR8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd2Q99JR8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms