Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Gm6912-201ENSMUST00000117218 544 ntBASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Gm13385-201ENSMUST00000121089 220 ntBASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Gm12151-201ENSMUST00000121374 290 ntBASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Gm44719-201ENSMUST00000206404 149 ntBASIC15.28■□□□□ 0.04
Rpap2Q8VC34 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpap2Q8VC34 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpap2Q8VC34 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpap2Q8VC34 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.27■□□□□ 0.03
Rpap2Q8VC34 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpap2Q8VC34 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpap2Q8VC34 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpap2Q8VC34 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms