Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Gm28760-201ENSMUST00000185995 736 ntBASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Gm2423-201ENSMUST00000074863 733 ntBASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atg4dQ8BGV9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Syt7-205ENSMUST00000224135 1557 ntBASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atg4dQ8BGV9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gm7488-201ENSMUST00000117148 684 ntBASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gm5279-201ENSMUST00000199575 745 ntBASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atg4dQ8BGV9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atg4dQ8BGV9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atg4dQ8BGV9 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.96□□□□□ -0.34
Atg4dQ8BGV9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atg4dQ8BGV9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atg4dQ8BGV9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atg4dQ8BGV9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms