Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Gm13015-201ENSMUST00000118674 204 ntBASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Gm37230-201ENSMUST00000194491 818 ntBASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Samm50Q8BGH2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Samm50Q8BGH2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Samm50Q8BGH2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Auts2-212ENSMUST00000178555 309 ntBASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Samm50Q8BGH2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Samm50Q8BGH2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Samm50Q8BGH2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Samm50Q8BGH2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Samm50Q8BGH2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms