Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snd1Q78PY7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snd1Q78PY7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Snd1Q78PY7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.22■□□□□ 0.03
Snd1Q78PY7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.22■□□□□ 0.03
Snd1Q78PY7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snd1Q78PY7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snd1Q78PY7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.21■□□□□ 0.03
Snd1Q78PY7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Gm44872-201ENSMUST00000207864 420 ntBASIC15.21■□□□□ 0.03
Snd1Q78PY7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.21■□□□□ 0.03
Snd1Q78PY7 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.21■□□□□ 0.03
Snd1Q78PY7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snd1Q78PY7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.21■□□□□ 0.02
Snd1Q78PY7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Snd1Q78PY7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snd1Q78PY7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.2■□□□□ 0.02
Snd1Q78PY7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.2■□□□□ 0.02
Snd1Q78PY7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.2■□□□□ 0.02
Snd1Q78PY7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.2■□□□□ 0.02
Snd1Q78PY7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Gm15427-201ENSMUST00000117288 531 ntBASIC15.19■□□□□ 0.02
Snd1Q78PY7 Gm9385-201ENSMUST00000117563 472 ntBASIC15.19■□□□□ 0.02
Snd1Q78PY7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.19■□□□□ 0.02
Snd1Q78PY7 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.19■□□□□ 0.02
Snd1Q78PY7 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.19■□□□□ 0.02
Snd1Q78PY7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.19■□□□□ 0.02
Snd1Q78PY7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.19■□□□□ 0.02
Snd1Q78PY7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.19■□□□□ 0.02
Snd1Q78PY7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms