Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb4Q6P8W9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb4Q6P8W9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Hmgb4Q6P8W9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmgb4Q6P8W9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Hmgb4Q6P8W9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hmgb4Q6P8W9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Gm15823-201ENSMUST00000064305 670 ntBASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmgb4Q6P8W9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Matn2-206ENSMUST00000228570 2798 ntBASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Gm11478-201ENSMUST00000117851 599 ntBASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Gm10275-202ENSMUST00000168697 495 ntBASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Gm10275-201ENSMUST00000092620 635 ntBASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Hmgb4Q6P8W9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms