Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm8927-201ENSMUST00000181978 981 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ctr9Q62018 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Gm5425-201ENSMUST00000214125 459 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 Gm3222-201ENSMUST00000071282 990 ntBASIC16.43■□□□□ 0.22
Ctr9Q62018 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ctr9Q62018 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ctr9Q62018 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Gm13385-201ENSMUST00000121089 220 ntBASIC16.42■□□□□ 0.22
Ctr9Q62018 Gm11424-201ENSMUST00000121929 829 ntBASIC16.42■□□□□ 0.22
Ctr9Q62018 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.42■□□□□ 0.22
Ctr9Q62018 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Gm5279-201ENSMUST00000199575 745 ntBASIC16.42■□□□□ 0.22
Ctr9Q62018 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.42■□□□□ 0.22
Ctr9Q62018 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Gm15823-201ENSMUST00000064305 670 ntBASIC16.42■□□□□ 0.22
Ctr9Q62018 Gm6180-201ENSMUST00000065243 498 ntBASIC16.42■□□□□ 0.22
Ctr9Q62018 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ctr9Q62018 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Ctr9Q62018 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ctr9Q62018 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ctr9Q62018 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Gm23984-201ENSMUST00000157139 203 ntBASIC16.41■□□□□ 0.22
Ctr9Q62018 Gm8584-201ENSMUST00000171982 758 ntBASIC16.41■□□□□ 0.22
Ctr9Q62018 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Gm5745-201ENSMUST00000183748 313 ntBASIC16.41■□□□□ 0.22
Ctr9Q62018 Gm18624-201ENSMUST00000220966 658 ntBASIC16.41■□□□□ 0.22
Ctr9Q62018 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ctr9Q62018 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ctr9Q62018 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ctr9Q62018 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ctr9Q62018 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ctr9Q62018 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gm5354-201ENSMUST00000182417 973 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms