Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.42■□□□□ 0.06
Ift88Q61371 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.42■□□□□ 0.06
Ift88Q61371 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 AA619741-201ENSMUST00000195095 646 ntBASIC15.42■□□□□ 0.06
Ift88Q61371 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Grk6-205ENSMUST00000224653 2976 ntBASIC15.42■□□□□ 0.06
Ift88Q61371 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ift88Q61371 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ift88Q61371 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ift88Q61371 Gm13823-201ENSMUST00000119930 345 ntBASIC15.41■□□□□ 0.06
Ift88Q61371 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.41■□□□□ 0.06
Ift88Q61371 AA543401-201ENSMUST00000164248 1269 ntBASIC15.41■□□□□ 0.06
Ift88Q61371 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.41■□□□□ 0.06
Ift88Q61371 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.41■□□□□ 0.06
Ift88Q61371 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ift88Q61371 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ift88Q61371 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Ift88Q61371 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.41■□□□□ 0.06
Ift88Q61371 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Ift88Q61371 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.41■□□□□ 0.06
Ift88Q61371 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ift88Q61371 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.4■□□□□ 0.06
Ift88Q61371 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.4■□□□□ 0.06
Ift88Q61371 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.4■□□□□ 0.06
Ift88Q61371 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.4■□□□□ 0.06
Ift88Q61371 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ift88Q61371 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ift88Q61371 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.4■□□□□ 0.06
Ift88Q61371 Gm6222-201ENSMUST00000120787 396 ntBASIC15.4■□□□□ 0.06
Ift88Q61371 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.4■□□□□ 0.06
Ift88Q61371 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.4■□□□□ 0.06
Ift88Q61371 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.4■□□□□ 0.06
Ift88Q61371 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.4■□□□□ 0.06
Ift88Q61371 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ift88Q61371 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ift88Q61371 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.4■□□□□ 0.06
Ift88Q61371 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ift88Q61371 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.4■□□□□ 0.06
Ift88Q61371 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ift88Q61371 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ift88Q61371 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms