Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.25□□□□□ -0.13
Slc6a4Q60857 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Gm19078-201ENSMUST00000206311 727 ntBASIC14.25□□□□□ -0.13
Slc6a4Q60857 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.25□□□□□ -0.13
Slc6a4Q60857 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a4Q60857 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Mir698-201ENSMUST00000102164 109 ntBASIC14.24□□□□□ -0.13
Slc6a4Q60857 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Gm11918-201ENSMUST00000121660 179 ntBASIC14.24□□□□□ -0.13
Slc6a4Q60857 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.24□□□□□ -0.13
Slc6a4Q60857 Gm18307-201ENSMUST00000206864 949 ntBASIC14.24□□□□□ -0.13
Slc6a4Q60857 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.24□□□□□ -0.13
Slc6a4Q60857 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a4Q60857 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.23□□□□□ -0.13
Slc6a4Q60857 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a4Q60857 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms