Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Gm20445-201ENSMUST00000061905 565 ntBASIC13.34□□□□□ -0.27
Xrcc1Q60596 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Xrcc1Q60596 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Xrcc1Q60596 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.33□□□□□ -0.28
Xrcc1Q60596 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Gm16215-201ENSMUST00000161990 637 ntBASIC13.33□□□□□ -0.28
Xrcc1Q60596 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Gm7730-201ENSMUST00000212486 454 ntBASIC13.33□□□□□ -0.28
Xrcc1Q60596 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Xrcc1Q60596 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.33□□□□□ -0.28
Xrcc1Q60596 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Xrcc1Q60596 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Gm21854-201ENSMUST00000179901 471 ntBASIC13.32□□□□□ -0.28
Xrcc1Q60596 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.32□□□□□ -0.28
Xrcc1Q60596 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.32□□□□□ -0.28
Xrcc1Q60596 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Xrcc1Q60596 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xrcc1Q60596 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Xrcc1Q60596 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms