Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shroom1Q5SX79 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shroom1Q5SX79 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Shroom1Q5SX79 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shroom1Q5SX79 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shroom1Q5SX79 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Shroom1Q5SX79 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Gm27701-201ENSMUST00000184498 110 ntBASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shroom1Q5SX79 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Gm12341-201ENSMUST00000119724 503 ntBASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Gm9002-201ENSMUST00000178437 499 ntBASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shroom1Q5SX79 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Mir7654-201ENSMUST00000185082 70 ntBASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shroom1Q5SX79 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms